But shouldn't people at least accept the disconnection of OOT from the Seal War? There are no facts being changed. The context simply shifts.
I disagree. Intentions were changed: OoT is no longer the Seal War. Facts were changed, both by OoT itself, its sequels, and now your postulations. It is a fact the story of OoT was written with the intent of acting out the Seal War, just as it is a fact that LA?s manual was written with the intent of detailing the events following ALttP. These cases are not different, and whether OoT remains as the first game in the timeline or if you think to have found any means of justification for its change of purpose does not matter: to me, it?s all irrelevant.
There is no precedence for this within the Zelda timeline. OOT isn't even so bold. Never before have the games simply been shifted around. Parallel universes have been added. The timeline has been filled in. But so far there has been no proof that things have changed so drastically. Sequels, even a psuedo sequel like LA, have never been ripped apart from each other and placed somewhere else.
Let me tell you, I do not care much for original intent, nor do I consider Nintendo?s past actions an important part of my theorizing, least of all when dealing with retcons. Not much of the Zelda mythos has been openly retconned, but not much of it remains as it originally was either.
I think we can all agree that LTTP was the only thing the manual could have been referring to at the time, so I'll spare us that argument. Reinterpreting it is using unclear language that has a clear intention against people who couldn't see future outcomes. It's like going back in time and using a gun to kill a man with a knife. There either is a retcon or there isn't. Either the manual counts and it refers to LTTP, or the manual doesn't count and it can't be used.
It?s either that, or the developers knew that the manual, as well as the game itself was ambiguous and lent itself well to a retcon, so they worked it into a story that followed naturally from the ending scene. Who knows (who cares?) why they did it? I know I think it works better, and I?m sure they do too. At any rate, the manual is still relevant: it simply references another game - much like ALttP's old manual.
In other words, when two pieces of information are on equal planes, then the last piece of information we recieved must be taken as the more accurate. If there is any doubt in that piece of information, then there must be equal doubt in how we apply that. A recent but ambiguous piece of information cannot just automatically supercede something that was pretty much told to us.
A new game cannot change what was said in an old manual; remakes aside, only a press release, interview or other sort of confirmation from Nintendo can do that. But the new game can adhere to that the story of the old manual. The fact that the Oracles work just as well - better, in fact - than ALttP, and the implications that follow from this matters more to me than your personal judgements, reasonable as they may be.
At least with OOT they retconned to begin with, screwing up LTTP's story. A retcon back is understandable. And everybody can look at the games afterward and clearly see the pattern. I see absolutely no reason to touch the equlibrium between LTTP and LA and confuse things so badly.
How about the idea that Nintendo INTENDED OoT to 1) split the timeline (since a split logically follows from and is implied by the ending) and 2) have a number of sequels that eventually led into ALttP (because that would only make sense*)? I see nothing wrong with this belief. Maybe you would argue that such unfounded speculation is unwarranted? Well, that?s a matter of personal opinion. Just as your assumption that Nintendo cares anything about the placement and relations of old (pre-OoT) games.
*And also appears to be precisely what is happening.